Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL1A1P02452 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL1A1P02452 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL1A1P02452 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL1A1P02452 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL1A1P02452 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL1A1P02452 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL1A1P02452 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.58■□□□□ 0.73
COL1A1P02452 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL1A1P02452 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL1A1P02452 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.58■□□□□ 0.73
COL1A1P02452 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
COL1A1P02452 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL1A1P02452 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
COL1A1P02452 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL1A1P02452 REXO1L8P-201ENST00000604378 1897 ntBASIC19.58■□□□□ 0.72
COL1A1P02452 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL1A1P02452 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL1A1P02452 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL1A1P02452 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
COL1A1P02452 DGCR5-201ENST00000399539 862 ntBASIC19.58■□□□□ 0.72
COL1A1P02452 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
COL1A1P02452 ACA64.2-201ENST00000459014 129 ntBASIC19.58■□□□□ 0.72
COL1A1P02452 SERBP1P3-201ENST00000459980 809 ntBASIC19.58■□□□□ 0.72
COL1A1P02452 POU5F1P6-201ENST00000466990 990 ntBASIC19.58■□□□□ 0.72
COL1A1P02452 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL1A1P02452 AC055876.2-201ENST00000531834 546 ntBASIC19.58■□□□□ 0.72
COL1A1P02452 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL1A1P02452 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
COL1A1P02452 AC025048.3-201ENST00000590609 569 ntBASIC19.58■□□□□ 0.72
COL1A1P02452 AL365330.1-201ENST00000607459 531 ntBASIC19.58■□□□□ 0.72
COL1A1P02452 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.58■□□□□ 0.72
COL1A1P02452 AL162274.1-201ENST00000617191 1098 ntBASIC19.58■□□□□ 0.72
COL1A1P02452 AC005702.4-201ENST00000618393 416 ntBASIC19.58■□□□□ 0.72
COL1A1P02452 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.58■□□□□ 0.72
COL1A1P02452 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
COL1A1P02452 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL1A1P02452 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL1A1P02452 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.58■□□□□ 0.72
COL1A1P02452 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.57■□□□□ 0.72
COL1A1P02452 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A1P02452 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.57■□□□□ 0.72
COL1A1P02452 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A1P02452 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A1P02452 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A1P02452 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A1P02452 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
COL1A1P02452 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.57■□□□□ 0.72
COL1A1P02452 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A1P02452 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
COL1A1P02452 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.57■□□□□ 0.72
COL1A1P02452 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
COL1A1P02452 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.57■□□□□ 0.72
COL1A1P02452 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.57■□□□□ 0.72
COL1A1P02452 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.57■□□□□ 0.72
COL1A1P02452 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A1P02452 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.57■□□□□ 0.72
COL1A1P02452 AC004461.2-201ENST00000629517 803 ntBASIC19.57■□□□□ 0.72
COL1A1P02452 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.57■□□□□ 0.72
COL1A1P02452 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.57■□□□□ 0.72
COL1A1P02452 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A1P02452 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A1P02452 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A1P02452 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A1P02452 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.57■□□□□ 0.72
COL1A1P02452 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.56■□□□□ 0.72
COL1A1P02452 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
COL1A1P02452 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.56■□□□□ 0.72
COL1A1P02452 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.56■□□□□ 0.72
COL1A1P02452 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.56■□□□□ 0.72
COL1A1P02452 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COL1A1P02452 ME2P1-201ENST00000426028 1970 ntBASIC19.56■□□□□ 0.72
COL1A1P02452 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
COL1A1P02452 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.56■□□□□ 0.72
COL1A1P02452 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.56■□□□□ 0.72
COL1A1P02452 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A1P02452 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COL1A1P02452 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms