Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MBD4O95243 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MBD4O95243 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
MBD4O95243 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MBD4O95243 PCDHA14-201ENST00000506751 2298 ntBASIC19.58■□□□□ 0.73
MBD4O95243 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MBD4O95243 ME2P1-201ENST00000426028 1970 ntBASIC19.58■□□□□ 0.73
MBD4O95243 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MBD4O95243 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.58■□□□□ 0.72
MBD4O95243 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.58■□□□□ 0.72
MBD4O95243 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.58■□□□□ 0.72
MBD4O95243 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD4O95243 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD4O95243 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.58■□□□□ 0.72
MBD4O95243 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.58■□□□□ 0.72
MBD4O95243 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MBD4O95243 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.58■□□□□ 0.72
MBD4O95243 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD4O95243 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD4O95243 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD4O95243 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MBD4O95243 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.58■□□□□ 0.72
MBD4O95243 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD4O95243 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD4O95243 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD4O95243 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.57■□□□□ 0.72
MBD4O95243 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MBD4O95243 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MBD4O95243 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
MBD4O95243 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
MBD4O95243 MIR943-201ENST00000401286 94 ntBASIC19.57■□□□□ 0.72
MBD4O95243 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.57■□□□□ 0.72
MBD4O95243 POU5F1P6-201ENST00000466990 990 ntBASIC19.57■□□□□ 0.72
MBD4O95243 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.57■□□□□ 0.72
MBD4O95243 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
MBD4O95243 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 AC061975.2-201ENST00000581722 295 ntBASIC19.57■□□□□ 0.72
MBD4O95243 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.57■□□□□ 0.72
MBD4O95243 AC007967.4-201ENST00000614700 386 ntBASIC19.57■□□□□ 0.72
MBD4O95243 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.57■□□□□ 0.72
MBD4O95243 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.57■□□□□ 0.72
MBD4O95243 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
MBD4O95243 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MBD4O95243 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
MBD4O95243 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MBD4O95243 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.57■□□□□ 0.72
MBD4O95243 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
MBD4O95243 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 MIR770-201ENST00000390219 98 ntBASIC19.56■□□□□ 0.72
MBD4O95243 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 TREML5P-201ENST00000421694 576 ntBASIC19.56■□□□□ 0.72
MBD4O95243 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.56■□□□□ 0.72
MBD4O95243 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.56■□□□□ 0.72
MBD4O95243 BANF1P1-201ENST00000553684 263 ntBASIC19.56■□□□□ 0.72
MBD4O95243 AC140878.1-201ENST00000565277 250 ntBASIC19.56■□□□□ 0.72
MBD4O95243 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.56■□□□□ 0.72
MBD4O95243 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.56■□□□□ 0.72
MBD4O95243 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.56■□□□□ 0.72
MBD4O95243 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.56■□□□□ 0.72
MBD4O95243 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.56■□□□□ 0.72
MBD4O95243 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD4O95243 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
MBD4O95243 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.56■□□□□ 0.72
MBD4O95243 FO538757.1-201ENST00000623083 1397 ntBASIC19.56■□□□□ 0.72
MBD4O95243 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
MBD4O95243 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MBD4O95243 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD4O95243 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MBD4O95243 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD4O95243 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.55■□□□□ 0.72
MBD4O95243 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
MBD4O95243 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.55■□□□□ 0.72
MBD4O95243 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.55■□□□□ 0.72
MBD4O95243 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MBD4O95243 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.55■□□□□ 0.72
MBD4O95243 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MBD4O95243 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.55■□□□□ 0.72
MBD4O95243 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms