Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDCD6O75340 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDCD6O75340 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.95□□□□□ -0.18
PDCD6O75340 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PDCD6O75340 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.95□□□□□ -0.18
PDCD6O75340 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PDCD6O75340 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PDCD6O75340 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PDCD6O75340 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PDCD6O75340 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PDCD6O75340 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
PDCD6O75340 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.94□□□□□ -0.18
PDCD6O75340 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.94□□□□□ -0.18
PDCD6O75340 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PDCD6O75340 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 MIR648-201ENST00000385046 94 ntBASIC13.94□□□□□ -0.18
PDCD6O75340 AC073621.1-201ENST00000392730 636 ntBASIC13.94□□□□□ -0.18
PDCD6O75340 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.94□□□□□ -0.18
PDCD6O75340 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PDCD6O75340 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.94□□□□□ -0.18
PDCD6O75340 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 AF238378.1-201ENST00000526806 358 ntBASIC13.94□□□□□ -0.18
PDCD6O75340 OR7E14P-202ENST00000530490 1290 ntBASIC13.94□□□□□ -0.18
PDCD6O75340 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 AC008667.4-201ENST00000607370 168 ntBASIC13.94□□□□□ -0.18
PDCD6O75340 MIR1199-201ENST00000621445 119 ntBASIC13.94□□□□□ -0.18
PDCD6O75340 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.94□□□□□ -0.18
PDCD6O75340 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.94□□□□□ -0.18
PDCD6O75340 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.94□□□□□ -0.18
PDCD6O75340 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.94□□□□□ -0.18
PDCD6O75340 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.94□□□□□ -0.18
PDCD6O75340 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PDCD6O75340 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.94□□□□□ -0.18
PDCD6O75340 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDCD6O75340 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.93□□□□□ -0.18
PDCD6O75340 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.93□□□□□ -0.18
PDCD6O75340 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.93□□□□□ -0.18
PDCD6O75340 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PDCD6O75340 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.93□□□□□ -0.18
PDCD6O75340 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.93□□□□□ -0.18
PDCD6O75340 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.93□□□□□ -0.18
PDCD6O75340 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.93□□□□□ -0.18
PDCD6O75340 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.93□□□□□ -0.18
PDCD6O75340 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.93□□□□□ -0.18
PDCD6O75340 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.93□□□□□ -0.18
PDCD6O75340 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.93□□□□□ -0.18
PDCD6O75340 AC073648.2-201ENST00000510116 352 ntBASIC13.93□□□□□ -0.18
PDCD6O75340 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PDCD6O75340 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.93□□□□□ -0.18
PDCD6O75340 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PDCD6O75340 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.93□□□□□ -0.18
PDCD6O75340 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.93□□□□□ -0.18
PDCD6O75340 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.93□□□□□ -0.18
PDCD6O75340 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.93□□□□□ -0.18
PDCD6O75340 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.93□□□□□ -0.18
PDCD6O75340 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PDCD6O75340 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PDCD6O75340 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.93□□□□□ -0.18
PDCD6O75340 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.93□□□□□ -0.18
PDCD6O75340 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.93□□□□□ -0.18
PDCD6O75340 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDCD6O75340 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms