Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.86■□□□□ 0.61
GADD45BO75293 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GADD45BO75293 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.86■□□□□ 0.61
GADD45BO75293 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GADD45BO75293 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GADD45BO75293 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GADD45BO75293 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.86■□□□□ 0.61
GADD45BO75293 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 ATP5G2P1-201ENST00000433580 426 ntBASIC18.86■□□□□ 0.61
GADD45BO75293 FOSL1P1-201ENST00000511041 816 ntBASIC18.86■□□□□ 0.61
GADD45BO75293 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.86■□□□□ 0.61
GADD45BO75293 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.86■□□□□ 0.61
GADD45BO75293 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.86■□□□□ 0.61
GADD45BO75293 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.86■□□□□ 0.61
GADD45BO75293 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 AC087388.1-201ENST00000571370 1112 ntBASIC18.86■□□□□ 0.61
GADD45BO75293 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.86■□□□□ 0.61
GADD45BO75293 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.86■□□□□ 0.61
GADD45BO75293 MTDHP4-201ENST00000600287 670 ntBASIC18.86■□□□□ 0.61
GADD45BO75293 AP000550.4-202ENST00000639755 178 ntBASIC18.86■□□□□ 0.61
GADD45BO75293 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GADD45BO75293 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GADD45BO75293 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.86■□□□□ 0.61
GADD45BO75293 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GADD45BO75293 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GADD45BO75293 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.85■□□□□ 0.61
GADD45BO75293 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.85■□□□□ 0.61
GADD45BO75293 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.85■□□□□ 0.61
GADD45BO75293 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GADD45BO75293 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GADD45BO75293 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GADD45BO75293 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GADD45BO75293 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GADD45BO75293 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GADD45BO75293 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.85■□□□□ 0.61
GADD45BO75293 MIR648-201ENST00000385046 94 ntBASIC18.85■□□□□ 0.61
GADD45BO75293 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GADD45BO75293 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.85■□□□□ 0.61
GADD45BO75293 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.85■□□□□ 0.61
GADD45BO75293 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.85■□□□□ 0.61
GADD45BO75293 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GADD45BO75293 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GADD45BO75293 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.85■□□□□ 0.61
GADD45BO75293 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
GADD45BO75293 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.85■□□□□ 0.61
GADD45BO75293 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
GADD45BO75293 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GADD45BO75293 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.85■□□□□ 0.61
GADD45BO75293 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.85■□□□□ 0.61
GADD45BO75293 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
GADD45BO75293 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
GADD45BO75293 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GADD45BO75293 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GADD45BO75293 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GADD45BO75293 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GADD45BO75293 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GADD45BO75293 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.84■□□□□ 0.61
GADD45BO75293 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.84■□□□□ 0.61
GADD45BO75293 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
GADD45BO75293 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.84■□□□□ 0.61
GADD45BO75293 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GADD45BO75293 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
GADD45BO75293 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
GADD45BO75293 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GADD45BO75293 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GADD45BO75293 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.84■□□□□ 0.61
GADD45BO75293 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.84■□□□□ 0.61
GADD45BO75293 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GADD45BO75293 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
GADD45BO75293 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GADD45BO75293 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GADD45BO75293 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.84■□□□□ 0.61
GADD45BO75293 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
GADD45BO75293 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GADD45BO75293 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GADD45BO75293 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.84■□□□□ 0.61
GADD45BO75293 RBM17P3-201ENST00000417687 1192 ntBASIC18.84■□□□□ 0.61
GADD45BO75293 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.84■□□□□ 0.61
GADD45BO75293 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.84■□□□□ 0.61
GADD45BO75293 FGFR3P6-201ENST00000457012 610 ntBASIC18.84■□□□□ 0.61
GADD45BO75293 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.84■□□□□ 0.61
GADD45BO75293 AC087641.1-201ENST00000557561 1021 ntBASIC18.84■□□□□ 0.61
GADD45BO75293 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.84■□□□□ 0.61
GADD45BO75293 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.84■□□□□ 0.61
GADD45BO75293 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms