Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.44■□□□□ 0.86
CACNA1FO60840 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1FO60840 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.44■□□□□ 0.86
CACNA1FO60840 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1FO60840 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.44■□□□□ 0.86
CACNA1FO60840 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1FO60840 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CACNA1FO60840 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1FO60840 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.44■□□□□ 0.86
CACNA1FO60840 TARDBPP1-201ENST00000442013 1203 ntBASIC20.44■□□□□ 0.86
CACNA1FO60840 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.44■□□□□ 0.86
CACNA1FO60840 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CACNA1FO60840 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CACNA1FO60840 AL391069.4-201ENST00000609583 481 ntBASIC20.44■□□□□ 0.86
CACNA1FO60840 AC024909.3-201ENST00000611513 2257 ntBASIC20.44■□□□□ 0.86
CACNA1FO60840 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.44■□□□□ 0.86
CACNA1FO60840 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CACNA1FO60840 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CACNA1FO60840 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1FO60840 AC069224.1-201ENST00000566372 1715 ntBASIC20.44■□□□□ 0.86
CACNA1FO60840 AL662844.4-201ENST00000606367 2838 ntBASIC20.44■□□□□ 0.86
CACNA1FO60840 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1FO60840 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1FO60840 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1FO60840 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CACNA1FO60840 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CACNA1FO60840 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.43■□□□□ 0.86
CACNA1FO60840 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1FO60840 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1FO60840 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1FO60840 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.43■□□□□ 0.86
CACNA1FO60840 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.43■□□□□ 0.86
CACNA1FO60840 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.43■□□□□ 0.86
CACNA1FO60840 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1FO60840 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1FO60840 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CACNA1FO60840 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CACNA1FO60840 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CACNA1FO60840 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CACNA1FO60840 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.43■□□□□ 0.86
CACNA1FO60840 TSPY16P-201ENST00000449843 468 ntBASIC20.43■□□□□ 0.86
CACNA1FO60840 SERBP1P3-201ENST00000459980 809 ntBASIC20.43■□□□□ 0.86
CACNA1FO60840 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.43■□□□□ 0.86
CACNA1FO60840 IGHV3-42-201ENST00000520410 361 ntBASIC20.43■□□□□ 0.86
CACNA1FO60840 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.43■□□□□ 0.86
CACNA1FO60840 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.43■□□□□ 0.86
CACNA1FO60840 AC008738.7-201ENST00000609744 511 ntBASIC20.43■□□□□ 0.86
CACNA1FO60840 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
CACNA1FO60840 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.42■□□□□ 0.86
CACNA1FO60840 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.42■□□□□ 0.86
CACNA1FO60840 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.42■□□□□ 0.86
CACNA1FO60840 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 TOMM22P5-201ENST00000416399 439 ntBASIC20.42■□□□□ 0.86
CACNA1FO60840 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.42■□□□□ 0.86
CACNA1FO60840 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.42■□□□□ 0.86
CACNA1FO60840 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 RN7SL618P-201ENST00000477850 296 ntBASIC20.42■□□□□ 0.86
CACNA1FO60840 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.42■□□□□ 0.86
CACNA1FO60840 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.42■□□□□ 0.86
CACNA1FO60840 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.42■□□□□ 0.86
CACNA1FO60840 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.42■□□□□ 0.86
CACNA1FO60840 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.42■□□□□ 0.86
CACNA1FO60840 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CACNA1FO60840 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.42■□□□□ 0.86
CACNA1FO60840 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CACNA1FO60840 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CACNA1FO60840 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CACNA1FO60840 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.41■□□□□ 0.86
CACNA1FO60840 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms