Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RN7SL752P-201ENST00000463779 287 ntBASIC19.12■□□□□ 0.65
CTNND1O60716 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CTNND1O60716 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.12■□□□□ 0.65
CTNND1O60716 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.12■□□□□ 0.65
CTNND1O60716 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.12■□□□□ 0.65
CTNND1O60716 MIR6069-201ENST00000620069 79 ntBASIC19.12■□□□□ 0.65
CTNND1O60716 IGHV3-72-202ENST00000621503 303 ntBASIC19.12■□□□□ 0.65
CTNND1O60716 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CTNND1O60716 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CTNND1O60716 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CTNND1O60716 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTNND1O60716 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.11■□□□□ 0.65
CTNND1O60716 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.11■□□□□ 0.65
CTNND1O60716 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CTNND1O60716 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.11■□□□□ 0.65
CTNND1O60716 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CTNND1O60716 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CTNND1O60716 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.11■□□□□ 0.65
CTNND1O60716 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CTNND1O60716 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
CTNND1O60716 AL139010.1-201ENST00000454878 894 ntBASIC19.11■□□□□ 0.65
CTNND1O60716 GPR53P-205ENST00000457298 1084 ntBASIC19.11■□□□□ 0.65
CTNND1O60716 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 AC008494.3-201ENST00000606615 944 ntBASIC19.11■□□□□ 0.65
CTNND1O60716 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.11■□□□□ 0.65
CTNND1O60716 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CTNND1O60716 AC004461.2-201ENST00000629517 803 ntBASIC19.11■□□□□ 0.65
CTNND1O60716 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.11■□□□□ 0.65
CTNND1O60716 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.11■□□□□ 0.65
CTNND1O60716 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.11■□□□□ 0.65
CTNND1O60716 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.11■□□□□ 0.65
CTNND1O60716 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CTNND1O60716 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CTNND1O60716 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.11■□□□□ 0.65
CTNND1O60716 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CTNND1O60716 AC009053.2-201ENST00000563701 2365 ntBASIC19.11■□□□□ 0.65
CTNND1O60716 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.11■□□□□ 0.65
CTNND1O60716 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.11■□□□□ 0.65
CTNND1O60716 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTNND1O60716 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CTNND1O60716 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CTNND1O60716 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CTNND1O60716 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CTNND1O60716 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.1■□□□□ 0.65
CTNND1O60716 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CTNND1O60716 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.1■□□□□ 0.65
CTNND1O60716 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CTNND1O60716 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 AL512384.1-201ENST00000406683 331 ntBASIC19.1■□□□□ 0.65
CTNND1O60716 MEP1AP4-201ENST00000423244 1087 ntBASIC19.1■□□□□ 0.65
CTNND1O60716 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.1■□□□□ 0.65
CTNND1O60716 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.1■□□□□ 0.65
CTNND1O60716 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 AC011495.1-201ENST00000498085 584 ntBASIC19.1■□□□□ 0.65
CTNND1O60716 AC055876.2-201ENST00000531834 546 ntBASIC19.1■□□□□ 0.65
CTNND1O60716 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.1■□□□□ 0.65
CTNND1O60716 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.1■□□□□ 0.65
CTNND1O60716 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.1■□□□□ 0.65
CTNND1O60716 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CTNND1O60716 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.1■□□□□ 0.65
CTNND1O60716 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTNND1O60716 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTNND1O60716 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CTNND1O60716 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTNND1O60716 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CTNND1O60716 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms