Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 AC109322.1-201ENST00000524499 1264 ntBASIC15.78■□□□□ 0.12
PRICKLE3O43900 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 ALG1L8P-201ENST00000533887 760 ntBASIC15.78■□□□□ 0.12
PRICKLE3O43900 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 AP3S2-216ENST00000617003 1561 ntBASIC15.78■□□□□ 0.12
PRICKLE3O43900 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 AL592424.1-201ENST00000563624 1536 ntBASIC15.78■□□□□ 0.12
PRICKLE3O43900 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.78■□□□□ 0.12
PRICKLE3O43900 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PRICKLE3O43900 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRICKLE3O43900 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRICKLE3O43900 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRICKLE3O43900 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRICKLE3O43900 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRICKLE3O43900 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRICKLE3O43900 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRICKLE3O43900 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRICKLE3O43900 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 TSEN15P1-201ENST00000423257 515 ntBASIC15.77■□□□□ 0.12
PRICKLE3O43900 RBPMS2P1-201ENST00000437762 623 ntBASIC15.77■□□□□ 0.12
PRICKLE3O43900 SPDYE14P-201ENST00000442619 822 ntBASIC15.77■□□□□ 0.12
PRICKLE3O43900 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 AL512356.2-201ENST00000546955 174 ntBASIC15.77■□□□□ 0.12
PRICKLE3O43900 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.77■□□□□ 0.12
PRICKLE3O43900 AP001059.3-201ENST00000619053 235 ntBASIC15.77■□□□□ 0.12
PRICKLE3O43900 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PRICKLE3O43900 U82695.1-201ENST00000635752 1889 ntBASIC15.77■□□□□ 0.11
PRICKLE3O43900 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRICKLE3O43900 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PRICKLE3O43900 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PRICKLE3O43900 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.77■□□□□ 0.11
PRICKLE3O43900 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PRICKLE3O43900 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRICKLE3O43900 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRICKLE3O43900 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PRICKLE3O43900 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRICKLE3O43900 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.77■□□□□ 0.11
PRICKLE3O43900 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRICKLE3O43900 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
PRICKLE3O43900 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRICKLE3O43900 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRICKLE3O43900 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRICKLE3O43900 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.76■□□□□ 0.11
PRICKLE3O43900 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.76■□□□□ 0.11
PRICKLE3O43900 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PRICKLE3O43900 REXO1L8P-201ENST00000604378 1897 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms