Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SLC28A2O43868 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.93■□□□□ 0.14
SLC28A2O43868 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.93■□□□□ 0.14
SLC28A2O43868 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC28A2O43868 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A2O43868 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SLC28A2O43868 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.93■□□□□ 0.14
SLC28A2O43868 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC28A2O43868 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.93■□□□□ 0.14
SLC28A2O43868 AC008761.3-201ENST00000624803 892 ntBASIC15.93■□□□□ 0.14
SLC28A2O43868 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A2O43868 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A2O43868 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A2O43868 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SLC28A2O43868 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A2O43868 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A2O43868 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A2O43868 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC28A2O43868 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
SLC28A2O43868 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A2O43868 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A2O43868 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A2O43868 NCF1C-201ENST00000438382 1427 ntBASIC15.93■□□□□ 0.14
SLC28A2O43868 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A2O43868 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SLC28A2O43868 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC28A2O43868 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SLC28A2O43868 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC28A2O43868 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC28A2O43868 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC28A2O43868 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.92■□□□□ 0.14
SLC28A2O43868 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.92■□□□□ 0.14
SLC28A2O43868 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
SLC28A2O43868 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC28A2O43868 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC28A2O43868 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A2O43868 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A2O43868 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC28A2O43868 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC28A2O43868 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
SLC28A2O43868 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC28A2O43868 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC28A2O43868 RHOQP3-201ENST00000437982 621 ntBASIC15.91■□□□□ 0.14
SLC28A2O43868 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC28A2O43868 AP002490.2-201ENST00000524791 560 ntBASIC15.91■□□□□ 0.14
SLC28A2O43868 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC28A2O43868 CR383656.12-201ENST00000549567 513 ntBASIC15.91■□□□□ 0.14
SLC28A2O43868 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.91■□□□□ 0.14
SLC28A2O43868 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC28A2O43868 AC068137.2-201ENST00000605408 478 ntBASIC15.91■□□□□ 0.14
SLC28A2O43868 AC009093.7-201ENST00000623853 1223 ntBASIC15.91■□□□□ 0.14
SLC28A2O43868 FLJ16779-201ENST00000612722 7638 ntBASIC15.91■□□□□ 0.14
SLC28A2O43868 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A2O43868 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC28A2O43868 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SLC28A2O43868 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms