Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
DUX1O43812 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
DUX1O43812 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
DUX1O43812 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
DUX1O43812 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
DUX1O43812 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.71■□□□□ 0.11
DUX1O43812 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.71■□□□□ 0.11
DUX1O43812 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.71■□□□□ 0.11
DUX1O43812 LINC01144-201ENST00000626198 1710 ntBASIC15.71■□□□□ 0.11
DUX1O43812 AC063926.2-201ENST00000623766 1308 ntBASIC15.71■□□□□ 0.11
DUX1O43812 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
DUX1O43812 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.71■□□□□ 0.11
DUX1O43812 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.71■□□□□ 0.11
DUX1O43812 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.71■□□□□ 0.11
DUX1O43812 AL080243.2-201ENST00000418783 582 ntBASIC15.71■□□□□ 0.11
DUX1O43812 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.71■□□□□ 0.11
DUX1O43812 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 AC061975.2-201ENST00000581722 295 ntBASIC15.71■□□□□ 0.11
DUX1O43812 AC004233.3-201ENST00000607794 1269 ntBASIC15.71■□□□□ 0.11
DUX1O43812 AL133215.2-201ENST00000609242 977 ntBASIC15.71■□□□□ 0.11
DUX1O43812 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.71■□□□□ 0.11
DUX1O43812 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.71■□□□□ 0.11
DUX1O43812 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.71■□□□□ 0.11
DUX1O43812 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.71■□□□□ 0.11
DUX1O43812 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.71■□□□□ 0.11
DUX1O43812 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DUX1O43812 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.71■□□□□ 0.1
DUX1O43812 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
DUX1O43812 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
DUX1O43812 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
DUX1O43812 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
DUX1O43812 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
DUX1O43812 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.71■□□□□ 0.1
DUX1O43812 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX1O43812 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX1O43812 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
DUX1O43812 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
DUX1O43812 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX1O43812 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX1O43812 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX1O43812 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.7■□□□□ 0.1
DUX1O43812 AC009477.1-201ENST00000452936 217 ntBASIC15.7■□□□□ 0.1
DUX1O43812 SERBP1P3-201ENST00000459980 809 ntBASIC15.7■□□□□ 0.1
DUX1O43812 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.7■□□□□ 0.1
DUX1O43812 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
DUX1O43812 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.7■□□□□ 0.1
DUX1O43812 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
DUX1O43812 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.7■□□□□ 0.1
DUX1O43812 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
DUX1O43812 AC027307.3-201ENST00000594262 1100 ntBASIC15.7■□□□□ 0.1
DUX1O43812 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.7■□□□□ 0.1
DUX1O43812 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX1O43812 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX1O43812 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX1O43812 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX1O43812 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
DUX1O43812 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.7■□□□□ 0.1
DUX1O43812 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
DUX1O43812 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.7■□□□□ 0.1
DUX1O43812 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
DUX1O43812 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
DUX1O43812 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
DUX1O43812 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX1O43812 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX1O43812 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX1O43812 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
DUX1O43812 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms