Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.59
NDUFA1O15239 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC11.33□□□□□ -0.59
NDUFA1O15239 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.33□□□□□ -0.6
NDUFA1O15239 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.6
NDUFA1O15239 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.33□□□□□ -0.6
NDUFA1O15239 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 TNRC18P2-201ENST00000417666 2714 ntBASIC11.33□□□□□ -0.6
NDUFA1O15239 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.33□□□□□ -0.6
NDUFA1O15239 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
NDUFA1O15239 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.33□□□□□ -0.6
NDUFA1O15239 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 AL845331.1-201ENST00000424978 1190 ntBASIC11.33□□□□□ -0.6
NDUFA1O15239 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.33□□□□□ -0.6
NDUFA1O15239 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.33□□□□□ -0.6
NDUFA1O15239 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.33□□□□□ -0.6
NDUFA1O15239 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
NDUFA1O15239 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
NDUFA1O15239 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.33□□□□□ -0.6
NDUFA1O15239 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 OR2I1P-209ENST00000641730 5365 ntBASIC11.33□□□□□ -0.6
NDUFA1O15239 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC11.33□□□□□ -0.6
NDUFA1O15239 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
NDUFA1O15239 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.33□□□□□ -0.6
NDUFA1O15239 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
NDUFA1O15239 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.33□□□□□ -0.6
NDUFA1O15239 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.33□□□□□ -0.6
NDUFA1O15239 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NDUFA1O15239 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.32□□□□□ -0.6
NDUFA1O15239 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
NDUFA1O15239 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
NDUFA1O15239 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.32□□□□□ -0.6
NDUFA1O15239 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.32□□□□□ -0.6
NDUFA1O15239 SIGLEC30P-201ENST00000455569 941 ntBASIC11.32□□□□□ -0.6
NDUFA1O15239 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.32□□□□□ -0.6
NDUFA1O15239 AC096582.2-201ENST00000510860 516 ntBASIC11.32□□□□□ -0.6
NDUFA1O15239 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 DUX4L17-201ENST00000557360 1267 ntBASIC11.32□□□□□ -0.6
NDUFA1O15239 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.32□□□□□ -0.6
NDUFA1O15239 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.32□□□□□ -0.6
NDUFA1O15239 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.32□□□□□ -0.6
NDUFA1O15239 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
NDUFA1O15239 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms