Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC108073.2-201ENST00000464002 357 ntBASIC15.89■□□□□ 0.13
SLC28A1O00337 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC28A1O00337 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A1O00337 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC28A1O00337 OR7E47P-204ENST00000575924 449 ntBASIC15.89■□□□□ 0.13
SLC28A1O00337 AC021097.1-201ENST00000607902 574 ntBASIC15.89■□□□□ 0.13
SLC28A1O00337 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A1O00337 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A1O00337 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLC28A1O00337 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A1O00337 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A1O00337 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A1O00337 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC28A1O00337 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SLC28A1O00337 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A1O00337 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A1O00337 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC28A1O00337 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A1O00337 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A1O00337 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC28A1O00337 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SLC28A1O00337 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC28A1O00337 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SLC28A1O00337 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC28A1O00337 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC28A1O00337 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLC28A1O00337 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
SLC28A1O00337 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SLC28A1O00337 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC28A1O00337 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 KRT18P67-201ENST00000432816 1264 ntBASIC15.88■□□□□ 0.13
SLC28A1O00337 HNRNPDP1-201ENST00000439535 754 ntBASIC15.88■□□□□ 0.13
SLC28A1O00337 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SLC28A1O00337 KRT18P56-201ENST00000507275 550 ntBASIC15.88■□□□□ 0.13
SLC28A1O00337 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC28A1O00337 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.88■□□□□ 0.13
SLC28A1O00337 AC012640.2-201ENST00000561606 901 ntBASIC15.88■□□□□ 0.13
SLC28A1O00337 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC28A1O00337 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC28A1O00337 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC28A1O00337 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SLC28A1O00337 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC28A1O00337 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC28A1O00337 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC28A1O00337 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC28A1O00337 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC28A1O00337 AL592424.1-201ENST00000563624 1536 ntBASIC15.88■□□□□ 0.13
SLC28A1O00337 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC28A1O00337 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SLC28A1O00337 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A1O00337 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
SLC28A1O00337 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC28A1O00337 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC28A1O00337 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
SLC28A1O00337 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC28A1O00337 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC28A1O00337 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC28A1O00337 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A1O00337 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC28A1O00337 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.87■□□□□ 0.13
SLC28A1O00337 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC28A1O00337 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC28A1O00337 AL160237.2-201ENST00000556165 472 ntBASIC15.87■□□□□ 0.13
SLC28A1O00337 ACTL9-202ENST00000612068 1252 ntBASIC15.87■□□□□ 0.13
SLC28A1O00337 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC28A1O00337 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms