Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 AC005034.1-201ENST00000426657 489 ntBASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 AP005018.1-201ENST00000525475 301 ntBASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 CR383656.12-201ENST00000549567 513 ntBASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 AL512361.1-201ENST00000554200 418 ntBASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 AL035252.4-201ENST00000624174 288 ntBASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 AC025048.6-201ENST00000634326 1161 ntBASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 PKD1P1-201ENST00000458669 6805 ntBASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HS3ST3A1Q9Y663 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 GAPDHP21-201ENST00000450301 1010 ntBASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 SDHAP3-202ENST00000515467 728 ntBASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 AC078925.2-201ENST00000624013 1973 ntBASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.03■□□□□ 0.16
HS3ST3A1Q9Y663 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 AC114501.2-201ENST00000439631 535 ntBASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 AC044860.1-202ENST00000559481 777 ntBASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 TP53TG3HP-202ENST00000569755 579 ntBASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
HS3ST3A1Q9Y663 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HS3ST3A1Q9Y663 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HS3ST3A1Q9Y663 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HS3ST3A1Q9Y663 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HS3ST3A1Q9Y663 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HS3ST3A1Q9Y663 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HS3ST3A1Q9Y663 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HS3ST3A1Q9Y663 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HS3ST3A1Q9Y663 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms