Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 AP001059.3-201ENST00000619053 235 ntBASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 Z92544.3-201ENST00000624747 417 ntBASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA3Q9Y5H0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 LYSMD4-203ENST00000378904 2122 ntBASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 KRT18P32-201ENST00000424695 1287 ntBASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 AC109635.5-201ENST00000533593 962 ntBASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 KRT8P23-201ENST00000560090 1207 ntBASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA3Q9Y5H0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA3Q9Y5H0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA3Q9Y5H0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA3Q9Y5H0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA3Q9Y5H0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA3Q9Y5H0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.08■□□□□ 0.17
PCDHGA3Q9Y5H0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 COX20P2-201ENST00000452636 358 ntBASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 AC051619.7-201ENST00000568314 623 ntBASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 AJ011932.1-201ENST00000621707 465 ntBASIC16.08■□□□□ 0.16
PCDHGA3Q9Y5H0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms