Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC021097.1-201ENST00000607902 574 ntBASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 PMS2P4-201ENST00000412466 1052 ntBASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 AL627223.1-201ENST00000416693 442 ntBASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 AL031055.1-201ENST00000606362 631 ntBASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 Z92544.3-201ENST00000624747 417 ntBASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 LINC01144-201ENST00000626198 1710 ntBASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB1Q9Y5F3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 PCGF3-213ENST00000620529 1899 ntBASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 AC093214.1-201ENST00000511688 1107 ntBASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 AC009093.7-201ENST00000623853 1223 ntBASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHB1Q9Y5F3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms