Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC004870.1-201ENST00000315132 882 ntBASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 KRT18P67-201ENST00000432816 1264 ntBASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 AC018712.1-201ENST00000455767 687 ntBASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 SLC25A6P2-201ENST00000497974 877 ntBASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 AC008735.5-201ENST00000623544 497 ntBASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 AC148477.8-201ENST00000624298 468 ntBASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RHBDD3Q9Y3P4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 AC105339.3-201ENST00000560043 636 ntBASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 REXO1L3P-201ENST00000622202 1288 ntBASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RHBDD3Q9Y3P4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 AC067930.6-201ENST00000623257 4947 ntBASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
RHBDD3Q9Y3P4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms