Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 MIR6869-201ENST00000619434 62 ntBASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 AL136982.4-201ENST00000437689 1740 ntBASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 CYP4F24P-201ENST00000586049 1580 ntBASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 AL645728.1-201ENST00000366221 2101 ntBASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 KRT8P44-201ENST00000441609 1350 ntBASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 AC067852.2-201ENST00000590513 2313 ntBASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.55■□□□□ 0.88
RTCBQ9Y3I0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 KRT8P22-201ENST00000562317 1415 ntBASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTCBQ9Y3I0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 AL162726.2-201ENST00000438986 1017 ntBASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTCBQ9Y3I0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms