Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC11.53□□□□□ -0.56
UBE2D4Q9Y2X8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
UBE2D4Q9Y2X8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.52□□□□□ -0.56
UBE2D4Q9Y2X8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
UBE2D4Q9Y2X8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.52□□□□□ -0.56
UBE2D4Q9Y2X8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.52□□□□□ -0.56
UBE2D4Q9Y2X8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UBE2D4Q9Y2X8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.52□□□□□ -0.56
UBE2D4Q9Y2X8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UBE2D4Q9Y2X8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.52□□□□□ -0.56
UBE2D4Q9Y2X8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
UBE2D4Q9Y2X8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UBE2D4Q9Y2X8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 LINC00265-3P-201ENST00000447588 903 ntBASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 PAWRP1-201ENST00000451083 565 ntBASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 AC074051.2-201ENST00000565115 352 ntBASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 AC091167.2-201ENST00000579581 588 ntBASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 AP002414.4-201ENST00000589764 1148 ntBASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 LINC01023-201ENST00000606054 436 ntBASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 AC010654.1-201ENST00000615722 808 ntBASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 AC069224.1-201ENST00000566372 1715 ntBASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2D4Q9Y2X8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 MIR648-201ENST00000385046 94 ntBASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 AC092329.2-201ENST00000598402 547 ntBASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 AC066615.1-201ENST00000640911 628 ntBASIC11.51□□□□□ -0.57
UBE2D4Q9Y2X8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms