Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 AL390755.1-201ENST00000623716 2027 ntBASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 AP000523.1-201ENST00000398242 1049 ntBASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 WWOX-216ENST00000569818 525 ntBASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 AL590326.2-201ENST00000625139 305 ntBASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 AC004817.3-201ENST00000602957 2129 ntBASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.74■□□□□ 0.11
LRCH1Q9Y2L9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 LINC01238-205ENST00000567549 1107 ntBASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 AC069224.1-201ENST00000566372 1715 ntBASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRCH1Q9Y2L9 AC015656.1-201ENST00000624209 3578 ntBASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.72■□□□□ 0.11
LRCH1Q9Y2L9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms