Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 AL603832.2-201ENST00000566195 2125 ntBASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 AC024909.3-201ENST00000611513 2257 ntBASIC18.28■□□□□ 0.52
BLOC1S4Q9NUP1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 AC142381.1-201ENST00000426099 345 ntBASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 AC079140.1-201ENST00000508039 487 ntBASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 FAM86C2P-203ENST00000528684 1004 ntBASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 AC005829.1-201ENST00000570002 483 ntBASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 AC008267.7-201ENST00000624570 1194 ntBASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BLOC1S4Q9NUP1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
BLOC1S4Q9NUP1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BLOC1S4Q9NUP1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
BLOC1S4Q9NUP1 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.27■□□□□ 0.51
BLOC1S4Q9NUP1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
BLOC1S4Q9NUP1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
BLOC1S4Q9NUP1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
BLOC1S4Q9NUP1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BLOC1S4Q9NUP1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 DNAJB3-201ENST00000446806 729 ntBASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 AC010327.4-202ENST00000591484 748 ntBASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.26■□□□□ 0.51
BLOC1S4Q9NUP1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms