Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.86■□□□□ 0.13
NECTIN3Q9NQS3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NECTIN3Q9NQS3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NECTIN3Q9NQS3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NECTIN3Q9NQS3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.86■□□□□ 0.13
NECTIN3Q9NQS3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
NECTIN3Q9NQS3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NECTIN3Q9NQS3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NECTIN3Q9NQS3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 AC007064.4-201ENST00000637740 555 ntBASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
NECTIN3Q9NQS3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 SLC22A20-204ENST00000530038 1673 ntBASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 AC002347.1-201ENST00000569543 541 ntBASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 AC005412.3-201ENST00000580309 715 ntBASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 TUBB8P12-201ENST00000308911 1335 ntBASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 TUBB7P-202ENST00000428444 1305 ntBASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 TUBB8P7-204ENST00000567960 1332 ntBASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 AL353732.1-201ENST00000569618 1459 ntBASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.84■□□□□ 0.13
NECTIN3Q9NQS3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.83■□□□□ 0.13
NECTIN3Q9NQS3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NECTIN3Q9NQS3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.83■□□□□ 0.13
NECTIN3Q9NQS3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
NECTIN3Q9NQS3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms