Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 AL118508.1-201ENST00000613502 2345 ntBASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 AC022144.1-201ENST00000602255 1580 ntBASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 AC008894.3-201ENST00000624324 3103 ntBASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KIAA1549Q9HCM3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 AL844908.2-201ENST00000609461 460 ntBASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KIAA1549Q9HCM3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.55□□□□□ -0.08
KIAA1549Q9HCM3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KIAA1549Q9HCM3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
KIAA1549Q9HCM3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KIAA1549Q9HCM3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KIAA1549Q9HCM3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms