Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KRT8P49-201ENST00000604166 1432 ntBASIC15.03■□□□□ -0
CHD8Q9HCK8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.03■□□□□ -0
CHD8Q9HCK8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.03■□□□□ -0
CHD8Q9HCK8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.03■□□□□ -0
CHD8Q9HCK8 AL139008.1-201ENST00000437894 228 ntBASIC15.03■□□□□ -0
CHD8Q9HCK8 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.03■□□□□ -0
CHD8Q9HCK8 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.03■□□□□ -0
CHD8Q9HCK8 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.03■□□□□ -0
CHD8Q9HCK8 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CHD8Q9HCK8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.03■□□□□ -0
CHD8Q9HCK8 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.03■□□□□ -0
CHD8Q9HCK8 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.03■□□□□ -0
CHD8Q9HCK8 AC025181.2-201ENST00000606994 802 ntBASIC15.03■□□□□ -0
CHD8Q9HCK8 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.03■□□□□ -0
CHD8Q9HCK8 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.03■□□□□ -0
CHD8Q9HCK8 AL805961.1-201ENST00000642026 753 ntBASIC15.03■□□□□ -0
CHD8Q9HCK8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
CHD8Q9HCK8 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.03■□□□□ -0
CHD8Q9HCK8 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.03■□□□□ -0
CHD8Q9HCK8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CHD8Q9HCK8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.03■□□□□ -0
CHD8Q9HCK8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.03■□□□□ -0
CHD8Q9HCK8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CHD8Q9HCK8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.03■□□□□ -0
CHD8Q9HCK8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
CHD8Q9HCK8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.03■□□□□ -0
CHD8Q9HCK8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CHD8Q9HCK8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHD8Q9HCK8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.02■□□□□ -0
CHD8Q9HCK8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHD8Q9HCK8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CHD8Q9HCK8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHD8Q9HCK8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHD8Q9HCK8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHD8Q9HCK8 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHD8Q9HCK8 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHD8Q9HCK8 AC012618.1-201ENST00000461223 412 ntBASIC15.02■□□□□ -0
CHD8Q9HCK8 VDAC1P7-201ENST00000462417 847 ntBASIC15.02■□□□□ -0
CHD8Q9HCK8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.02■□□□□ -0
CHD8Q9HCK8 AC078819.1-201ENST00000547454 765 ntBASIC15.02■□□□□ -0
CHD8Q9HCK8 AC012085.1-201ENST00000548270 765 ntBASIC15.02■□□□□ -0
CHD8Q9HCK8 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.02■□□□□ -0
CHD8Q9HCK8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHD8Q9HCK8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.02■□□□□ -0
CHD8Q9HCK8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.02■□□□□ -0
CHD8Q9HCK8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 AL596276.2-201ENST00000447525 331 ntBASIC15.02□□□□□ -0.01
CHD8Q9HCK8 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.02□□□□□ -0.01
CHD8Q9HCK8 COX5BP1-201ENST00000507622 393 ntBASIC15.02□□□□□ -0.01
CHD8Q9HCK8 AC022217.1-201ENST00000521069 738 ntBASIC15.02□□□□□ -0.01
CHD8Q9HCK8 AC025279.2-201ENST00000569730 653 ntBASIC15.02□□□□□ -0.01
CHD8Q9HCK8 AC024267.1-201ENST00000582320 895 ntBASIC15.02□□□□□ -0.01
CHD8Q9HCK8 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHD8Q9HCK8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 C1QBPP1-201ENST00000400117 770 ntBASIC15.01□□□□□ -0.01
CHD8Q9HCK8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 RN7SL8P-201ENST00000461771 266 ntBASIC15.01□□□□□ -0.01
CHD8Q9HCK8 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 BX539320.1-201ENST00000623759 877 ntBASIC15.01□□□□□ -0.01
CHD8Q9HCK8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHD8Q9HCK8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms