Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VAT1LQ9HCJ6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VAT1LQ9HCJ6 ALOX12P2-203ENST00000570921 1945 ntBASIC19.08■□□□□ 0.65
VAT1LQ9HCJ6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.08■□□□□ 0.65
VAT1LQ9HCJ6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VAT1LQ9HCJ6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 AC142381.1-201ENST00000426099 345 ntBASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 RFPL4AP1-201ENST00000530883 850 ntBASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 FOXO1B-201ENST00000504678 1527 ntBASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
VAT1LQ9HCJ6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 PCGF3-213ENST00000620529 1899 ntBASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 SPDYE14P-201ENST00000442619 822 ntBASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 AC073389.1-201ENST00000595595 795 ntBASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VAT1LQ9HCJ6 AC008677.1-201ENST00000519230 1561 ntBASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 AP3S2-216ENST00000617003 1561 ntBASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 GGT3P-204ENST00000453783 1664 ntBASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 SPTSSB-204ENST00000617024 1292 ntBASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 AP001059.3-201ENST00000619053 235 ntBASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VAT1LQ9HCJ6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAT1LQ9HCJ6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAT1LQ9HCJ6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VAT1LQ9HCJ6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VAT1LQ9HCJ6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAT1LQ9HCJ6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms