Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MCCD1P2-201ENST00000423228 335 ntBASIC14.46□□□□□ -0.09
CDH20Q9HBT6 FAM58CP-201ENST00000435741 640 ntBASIC14.46□□□□□ -0.09
CDH20Q9HBT6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 AC092865.5-201ENST00000545435 363 ntBASIC14.46□□□□□ -0.09
CDH20Q9HBT6 MIR3687-2-201ENST00000577708 61 ntBASIC14.46□□□□□ -0.09
CDH20Q9HBT6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 MIR3909-201ENST00000579518 119 ntBASIC14.46□□□□□ -0.09
CDH20Q9HBT6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 AL009183.1-201ENST00000603760 355 ntBASIC14.46□□□□□ -0.09
CDH20Q9HBT6 MIR3687-1-201ENST00000614492 61 ntBASIC14.46□□□□□ -0.09
CDH20Q9HBT6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH20Q9HBT6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH20Q9HBT6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.46□□□□□ -0.1
CDH20Q9HBT6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.1
CDH20Q9HBT6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH20Q9HBT6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH20Q9HBT6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH20Q9HBT6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CDH20Q9HBT6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH20Q9HBT6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.46□□□□□ -0.1
CDH20Q9HBT6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 YBX2P1-201ENST00000394192 760 ntBASIC14.45□□□□□ -0.1
CDH20Q9HBT6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 AL161645.1-201ENST00000622716 1255 ntBASIC14.45□□□□□ -0.1
CDH20Q9HBT6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH20Q9HBT6 AC092919.2-201ENST00000623631 1645 ntBASIC14.44□□□□□ -0.1
CDH20Q9HBT6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 HLA-A-202ENST00000376806 1854 ntBASIC14.44□□□□□ -0.1
CDH20Q9HBT6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 AC109635.5-201ENST00000533593 962 ntBASIC14.44□□□□□ -0.1
CDH20Q9HBT6 AL078644.1-201ENST00000609881 752 ntBASIC14.44□□□□□ -0.1
CDH20Q9HBT6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.44□□□□□ -0.1
CDH20Q9HBT6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms