Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 TIMM8BP1-201ENST00000452384 211 ntBASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 SLC25A39P2-201ENST00000537614 270 ntBASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 AL596325.1-201ENST00000563991 1082 ntBASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 AC009093.7-201ENST00000623853 1223 ntBASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCAF1Q9H7N4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 AL024508.2-201ENST00000607749 1894 ntBASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 AC092384.3-202ENST00000564646 2873 ntBASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 KRT17P7-201ENST00000451704 1104 ntBASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SCAF1Q9H7N4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 AL355312.1-201ENST00000407115 2176 ntBASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 AL627223.1-201ENST00000416693 442 ntBASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 RPAP2P1-201ENST00000603626 1168 ntBASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
SCAF1Q9H7N4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 ACTR6P1-201ENST00000514311 1104 ntBASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 AC026616.1-201ENST00000523157 525 ntBASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 AC025165.5-201ENST00000602802 578 ntBASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC24.73■■□□□ 1.55
SCAF1Q9H7N4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms