Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 AL662844.1-201ENST00000546340 181 ntBASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 AC006449.5-201ENST00000610658 2098 ntBASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 AC108751.1-201ENST00000490852 363 ntBASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 AP001005.1-201ENST00000571755 1248 ntBASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 TSPY26P-202ENST00000565928 3884 ntBASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC68Q9H2F9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.58■□□□□ 0.25
CCDC68Q9H2F9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC68Q9H2F9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC68Q9H2F9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC68Q9H2F9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC68Q9H2F9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 AC012569.1-201ENST00000591191 1524 ntBASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CCDC68Q9H2F9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms