Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS11Q9H270 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.65■□□□□ 0.26
VPS11Q9H270 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.65■□□□□ 0.26
VPS11Q9H270 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.64■□□□□ 0.26
VPS11Q9H270 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
VPS11Q9H270 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
VPS11Q9H270 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
VPS11Q9H270 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.64■□□□□ 0.26
VPS11Q9H270 AC144831.1-201ENST00000573312 2656 ntBASIC16.64■□□□□ 0.26
VPS11Q9H270 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
VPS11Q9H270 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.64■□□□□ 0.25
VPS11Q9H270 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.64■□□□□ 0.25
VPS11Q9H270 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.64■□□□□ 0.25
VPS11Q9H270 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.64■□□□□ 0.25
VPS11Q9H270 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.64■□□□□ 0.25
VPS11Q9H270 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.64■□□□□ 0.25
VPS11Q9H270 MPDU1-223ENST00000582151 728 ntBASIC16.64■□□□□ 0.25
VPS11Q9H270 MTDHP3-201ENST00000594186 672 ntBASIC16.64■□□□□ 0.25
VPS11Q9H270 AC091076.1-201ENST00000610741 619 ntBASIC16.64■□□□□ 0.25
VPS11Q9H270 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.64■□□□□ 0.25
VPS11Q9H270 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
VPS11Q9H270 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.64■□□□□ 0.25
VPS11Q9H270 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS11Q9H270 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
VPS11Q9H270 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
VPS11Q9H270 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.63■□□□□ 0.25
VPS11Q9H270 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
VPS11Q9H270 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.63■□□□□ 0.25
VPS11Q9H270 AL031731.1-201ENST00000642131 2094 ntBASIC16.63■□□□□ 0.25
VPS11Q9H270 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
VPS11Q9H270 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.63■□□□□ 0.25
VPS11Q9H270 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.63■□□□□ 0.25
VPS11Q9H270 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VPS11Q9H270 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VPS11Q9H270 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.63■□□□□ 0.25
VPS11Q9H270 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
VPS11Q9H270 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.63■□□□□ 0.25
VPS11Q9H270 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 RBM17P3-201ENST00000417687 1192 ntBASIC16.63■□□□□ 0.25
VPS11Q9H270 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.63■□□□□ 0.25
VPS11Q9H270 PAWRP1-201ENST00000451083 565 ntBASIC16.63■□□□□ 0.25
VPS11Q9H270 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.63■□□□□ 0.25
VPS11Q9H270 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
VPS11Q9H270 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.63■□□□□ 0.25
VPS11Q9H270 DBET-201ENST00000630918 3363 ntBASIC16.63■□□□□ 0.25
VPS11Q9H270 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
VPS11Q9H270 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
VPS11Q9H270 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 AC068587.6-202ENST00000641839 5619 ntBASIC16.63■□□□□ 0.25
VPS11Q9H270 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
VPS11Q9H270 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VPS11Q9H270 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VPS11Q9H270 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.62■□□□□ 0.25
VPS11Q9H270 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.62■□□□□ 0.25
VPS11Q9H270 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.62■□□□□ 0.25
VPS11Q9H270 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.62■□□□□ 0.25
VPS11Q9H270 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VPS11Q9H270 AC087163.2-201ENST00000457299 853 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms