Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIK2Q9H0K1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SIK2Q9H0K1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.13■□□□□ 0.33
SIK2Q9H0K1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIK2Q9H0K1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
SIK2Q9H0K1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIK2Q9H0K1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIK2Q9H0K1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SIK2Q9H0K1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SIK2Q9H0K1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 PCGF3-213ENST00000620529 1899 ntBASIC17.12■□□□□ 0.33
SIK2Q9H0K1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 AC243562.1-201ENST00000560672 389 ntBASIC17.12■□□□□ 0.33
SIK2Q9H0K1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SIK2Q9H0K1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 AC079140.1-201ENST00000508039 487 ntBASIC17.11■□□□□ 0.33
SIK2Q9H0K1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 GPALPP1-207ENST00000611650 899 ntBASIC17.11■□□□□ 0.33
SIK2Q9H0K1 AC006538.3-201ENST00000612495 578 ntBASIC17.11■□□□□ 0.33
SIK2Q9H0K1 AC105339.1-204ENST00000636249 355 ntBASIC17.11■□□□□ 0.33
SIK2Q9H0K1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SIK2Q9H0K1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SIK2Q9H0K1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms