Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 REXO1L6P-202ENST00000619970 1078 ntBASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 CDC14C-201ENST00000428251 1719 ntBASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 TSPY26P-202ENST00000565928 3884 ntBASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 MIR648-201ENST00000385046 94 ntBASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 TSPY19P-201ENST00000418461 509 ntBASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 TSPY18P-201ENST00000441642 509 ntBASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC021087.4-201ENST00000563761 564 ntBASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC091304.2-201ENST00000564639 760 ntBASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC107918.4-202ENST00000641623 219 ntBASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SHANK2-AS3Q9BTD1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 LINC02447-202ENST00000501888 2146 ntBASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 AP005117.1-202ENST00000581724 1908 ntBASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 ARMC10P1-201ENST00000313754 855 ntBASIC12.71□□□□□ -0.37
SHANK2-AS3Q9BTD1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms