Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ABCA3Q99758 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ABCA3Q99758 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ABCA3Q99758 TEX30-203ENST00000376022 828 ntTSL 2 BASIC21.46■■□□□ 1.03
ABCA3Q99758 HNRNPA1P48-202ENST00000565308 961 ntBASIC21.46■■□□□ 1.03
ABCA3Q99758 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC21.46■■□□□ 1.03
ABCA3Q99758 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ABCA3Q99758 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ABCA3Q99758 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.46■■□□□ 1.03
ABCA3Q99758 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
ABCA3Q99758 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.46■■□□□ 1.03
ABCA3Q99758 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ABCA3Q99758 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
ABCA3Q99758 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
ABCA3Q99758 AL603756.1-201ENST00000606511 2163 ntBASIC21.46■■□□□ 1.03
ABCA3Q99758 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ABCA3Q99758 AC134312.5-201ENST00000568031 1313 ntBASIC21.46■■□□□ 1.03
ABCA3Q99758 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ABCA3Q99758 SLC25A24P2-201ENST00000415059 510 ntBASIC21.46■■□□□ 1.03
ABCA3Q99758 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC21.46■■□□□ 1.03
ABCA3Q99758 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21.46■■□□□ 1.03
ABCA3Q99758 ENPP7P5-201ENST00000541031 1031 ntBASIC21.46■■□□□ 1.03
ABCA3Q99758 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC21.46■■□□□ 1.03
ABCA3Q99758 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.46■■□□□ 1.03
ABCA3Q99758 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.46■■□□□ 1.03
ABCA3Q99758 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ABCA3Q99758 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.46■■□□□ 1.03
ABCA3Q99758 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.46■■□□□ 1.03
ABCA3Q99758 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.46■■□□□ 1.03
ABCA3Q99758 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.46■■□□□ 1.03
ABCA3Q99758 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
ABCA3Q99758 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
ABCA3Q99758 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.45■■□□□ 1.02
ABCA3Q99758 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ABCA3Q99758 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.45■■□□□ 1.02
ABCA3Q99758 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ABCA3Q99758 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ABCA3Q99758 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ABCA3Q99758 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
ABCA3Q99758 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ABCA3Q99758 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ABCA3Q99758 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC21.45■■□□□ 1.02
ABCA3Q99758 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
ABCA3Q99758 OARD1-212ENST00000482515 832 ntTSL 2 BASIC21.45■■□□□ 1.02
ABCA3Q99758 SCARNA20.5-201ENST00000516991 142 ntBASIC21.45■■□□□ 1.02
ABCA3Q99758 NEU3-202ENST00000526068 431 ntTSL 2 BASIC21.45■■□□□ 1.02
ABCA3Q99758 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC21.45■■□□□ 1.02
ABCA3Q99758 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC21.45■■□□□ 1.02
ABCA3Q99758 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ABCA3Q99758 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.45■■□□□ 1.02
ABCA3Q99758 AC134043.2-201ENST00000624206 2238 ntBASIC21.44■■□□□ 1.02
ABCA3Q99758 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ABCA3Q99758 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ABCA3Q99758 GUK1-206ENST00000366723 845 ntTSL 5 BASIC21.44■■□□□ 1.02
ABCA3Q99758 CHMP4BP1-201ENST00000556017 588 ntBASIC21.44■■□□□ 1.02
ABCA3Q99758 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21.44■■□□□ 1.02
ABCA3Q99758 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ABCA3Q99758 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
ABCA3Q99758 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ABCA3Q99758 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ABCA3Q99758 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ABCA3Q99758 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC21.44■■□□□ 1.02
ABCA3Q99758 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC21.44■■□□□ 1.02
ABCA3Q99758 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC21.44■■□□□ 1.02
ABCA3Q99758 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.43■■□□□ 1.02
ABCA3Q99758 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ABCA3Q99758 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC21.43■■□□□ 1.02
ABCA3Q99758 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC21.43■■□□□ 1.02
ABCA3Q99758 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.43■■□□□ 1.02
ABCA3Q99758 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.43■■□□□ 1.02
ABCA3Q99758 AC093433.1-201ENST00000458048 571 ntBASIC21.43■■□□□ 1.02
ABCA3Q99758 AC015967.2-201ENST00000624092 234 ntBASIC21.43■■□□□ 1.02
ABCA3Q99758 AC006435.4-201ENST00000625037 234 ntBASIC21.43■■□□□ 1.02
ABCA3Q99758 AL356737.1-201ENST00000634391 234 ntBASIC21.43■■□□□ 1.02
ABCA3Q99758 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
ABCA3Q99758 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.43■■□□□ 1.02
ABCA3Q99758 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ABCA3Q99758 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ABCA3Q99758 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ABCA3Q99758 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ABCA3Q99758 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
ABCA3Q99758 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ABCA3Q99758 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.43■■□□□ 1.02
ABCA3Q99758 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
ABCA3Q99758 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.43■■□□□ 1.02
ABCA3Q99758 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ABCA3Q99758 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ABCA3Q99758 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
ABCA3Q99758 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.43■■□□□ 1.02
ABCA3Q99758 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ABCA3Q99758 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC21.43■■□□□ 1.02
ABCA3Q99758 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC21.43■■□□□ 1.02
ABCA3Q99758 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC21.43■■□□□ 1.02
ABCA3Q99758 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC21.43■■□□□ 1.02
ABCA3Q99758 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
ABCA3Q99758 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.43■■□□□ 1.02
ABCA3Q99758 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
ABCA3Q99758 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
ABCA3Q99758 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ABCA3Q99758 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms