Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.95■□□□□ 0.3
CDCA3Q99618 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDCA3Q99618 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CDCA3Q99618 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDCA3Q99618 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.95■□□□□ 0.3
CDCA3Q99618 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.95■□□□□ 0.3
CDCA3Q99618 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.95■□□□□ 0.3
CDCA3Q99618 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDCA3Q99618 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.95■□□□□ 0.3
CDCA3Q99618 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.95■□□□□ 0.3
CDCA3Q99618 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.95■□□□□ 0.3
CDCA3Q99618 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.95■□□□□ 0.3
CDCA3Q99618 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.95■□□□□ 0.3
CDCA3Q99618 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDCA3Q99618 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDCA3Q99618 GGT4P-201ENST00000623672 1708 ntBASIC16.95■□□□□ 0.3
CDCA3Q99618 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDCA3Q99618 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDCA3Q99618 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CDCA3Q99618 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.95■□□□□ 0.3
CDCA3Q99618 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.95■□□□□ 0.3
CDCA3Q99618 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.94■□□□□ 0.3
CDCA3Q99618 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.94■□□□□ 0.3
CDCA3Q99618 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CDCA3Q99618 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 AL136982.4-201ENST00000437689 1740 ntBASIC16.94■□□□□ 0.3
CDCA3Q99618 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CDCA3Q99618 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.94■□□□□ 0.3
CDCA3Q99618 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDCA3Q99618 ENPP7P5-201ENST00000541031 1031 ntBASIC16.94■□□□□ 0.3
CDCA3Q99618 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.94■□□□□ 0.3
CDCA3Q99618 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDCA3Q99618 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
CDCA3Q99618 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDCA3Q99618 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.94■□□□□ 0.3
CDCA3Q99618 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CDCA3Q99618 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.94■□□□□ 0.3
CDCA3Q99618 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDCA3Q99618 AC093525.8-201ENST00000624099 1342 ntBASIC16.94■□□□□ 0.3
CDCA3Q99618 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA3Q99618 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.93■□□□□ 0.3
CDCA3Q99618 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
CDCA3Q99618 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA3Q99618 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 AC020907.1-201ENST00000616460 1350 ntBASIC16.93■□□□□ 0.3
CDCA3Q99618 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 AL390961.4-201ENST00000623958 2535 ntBASIC16.93■□□□□ 0.3
CDCA3Q99618 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDCA3Q99618 AC092933.1-201ENST00000393644 945 ntBASIC16.93■□□□□ 0.3
CDCA3Q99618 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.93■□□□□ 0.3
CDCA3Q99618 BRWD1P1-201ENST00000401091 371 ntBASIC16.93■□□□□ 0.3
CDCA3Q99618 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDCA3Q99618 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.93■□□□□ 0.3
CDCA3Q99618 FAM21FP-201ENST00000426241 1131 ntBASIC16.93■□□□□ 0.3
CDCA3Q99618 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDCA3Q99618 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.93■□□□□ 0.3
CDCA3Q99618 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA3Q99618 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.93■□□□□ 0.3
CDCA3Q99618 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.93■□□□□ 0.3
CDCA3Q99618 TDH-203ENST00000531764 1110 ntBASIC16.93■□□□□ 0.3
CDCA3Q99618 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA3Q99618 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA3Q99618 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.93■□□□□ 0.3
CDCA3Q99618 AL158212.4-201ENST00000624062 1286 ntBASIC16.93■□□□□ 0.3
CDCA3Q99618 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA3Q99618 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 AC067852.2-201ENST00000590513 2313 ntBASIC16.93■□□□□ 0.3
CDCA3Q99618 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.93■□□□□ 0.3
CDCA3Q99618 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA3Q99618 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA3Q99618 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.93■□□□□ 0.3
CDCA3Q99618 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.93■□□□□ 0.3
CDCA3Q99618 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.93■□□□□ 0.3
CDCA3Q99618 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDCA3Q99618 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDCA3Q99618 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms