Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPENQ96T58 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPENQ96T58 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SPENQ96T58 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.61□□□□□ -0.07
SPENQ96T58 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SPENQ96T58 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.61□□□□□ -0.07
SPENQ96T58 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SPENQ96T58 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.61□□□□□ -0.07
SPENQ96T58 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.61□□□□□ -0.07
SPENQ96T58 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPENQ96T58 AC005229.1-201ENST00000392885 409 ntBASIC14.61□□□□□ -0.07
SPENQ96T58 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.61□□□□□ -0.07
SPENQ96T58 RRP7BP-205ENST00000566851 833 ntBASIC14.61□□□□□ -0.07
SPENQ96T58 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SPENQ96T58 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPENQ96T58 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SPENQ96T58 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SPENQ96T58 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SPENQ96T58 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SPENQ96T58 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.6□□□□□ -0.07
SPENQ96T58 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SPENQ96T58 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.6□□□□□ -0.07
SPENQ96T58 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SPENQ96T58 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.6□□□□□ -0.07
SPENQ96T58 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.6□□□□□ -0.07
SPENQ96T58 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.6□□□□□ -0.07
SPENQ96T58 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 AL021920.2-201ENST00000624828 1351 ntBASIC14.6□□□□□ -0.07
SPENQ96T58 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.6□□□□□ -0.07
SPENQ96T58 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.6□□□□□ -0.07
SPENQ96T58 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.6□□□□□ -0.07
SPENQ96T58 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.6□□□□□ -0.07
SPENQ96T58 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SPENQ96T58 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.6□□□□□ -0.07
SPENQ96T58 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SPENQ96T58 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.6□□□□□ -0.07
SPENQ96T58 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.6□□□□□ -0.07
SPENQ96T58 AC133552.6-201ENST00000613406 534 ntBASIC14.6□□□□□ -0.07
SPENQ96T58 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.6□□□□□ -0.07
SPENQ96T58 CYP4F24P-201ENST00000586049 1580 ntBASIC14.6□□□□□ -0.07
SPENQ96T58 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 AL391256.1-201ENST00000443260 1855 ntBASIC14.6□□□□□ -0.07
SPENQ96T58 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.6□□□□□ -0.07
SPENQ96T58 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.6□□□□□ -0.07
SPENQ96T58 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.6□□□□□ -0.07
SPENQ96T58 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.6□□□□□ -0.07
SPENQ96T58 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.6□□□□□ -0.07
SPENQ96T58 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 AC013467.2-201ENST00000605472 835 ntBASIC14.6□□□□□ -0.07
SPENQ96T58 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.6□□□□□ -0.07
SPENQ96T58 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.6□□□□□ -0.07
SPENQ96T58 AC020765.3-201ENST00000613051 740 ntBASIC14.6□□□□□ -0.07
SPENQ96T58 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SPENQ96T58 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.59□□□□□ -0.07
SPENQ96T58 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.59□□□□□ -0.07
SPENQ96T58 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SPENQ96T58 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.59□□□□□ -0.07
SPENQ96T58 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.59□□□□□ -0.07
SPENQ96T58 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.59□□□□□ -0.07
SPENQ96T58 BTNL10-201ENST00000595971 695 ntBASIC14.59□□□□□ -0.07
SPENQ96T58 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.59□□□□□ -0.07
SPENQ96T58 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
SPENQ96T58 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.59□□□□□ -0.07
SPENQ96T58 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SPENQ96T58 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SPENQ96T58 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.59□□□□□ -0.07
SPENQ96T58 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.59□□□□□ -0.07
SPENQ96T58 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.59□□□□□ -0.07
SPENQ96T58 AC105129.2-201ENST00000559536 390 ntBASIC14.59□□□□□ -0.07
SPENQ96T58 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.59□□□□□ -0.07
SPENQ96T58 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SPENQ96T58 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms