Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 CD81-202ENST00000381036 880 ntTSL 3 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 POU5F1P6-201ENST00000466990 990 ntBASIC23.82■■□□□ 1.4
SIN3AQ96ST3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 AC105233.2-201ENST00000523697 349 ntBASIC23.82■■□□□ 1.4
SIN3AQ96ST3 AF228730.5-201ENST00000530288 346 ntBASIC23.82■■□□□ 1.4
SIN3AQ96ST3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 AC004835.2-201ENST00000603762 682 ntBASIC23.82■■□□□ 1.4
SIN3AQ96ST3 GPALPP1-207ENST00000611650 899 ntBASIC23.82■■□□□ 1.4
SIN3AQ96ST3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SIN3AQ96ST3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 AL592424.1-201ENST00000563624 1536 ntBASIC23.81■■□□□ 1.4
SIN3AQ96ST3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 IGHV3-62-201ENST00000520057 340 ntBASIC23.81■■□□□ 1.4
SIN3AQ96ST3 AC109322.1-201ENST00000524499 1264 ntBASIC23.81■■□□□ 1.4
SIN3AQ96ST3 SNHG9-202ENST00000564014 471 ntBASIC23.81■■□□□ 1.4
SIN3AQ96ST3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 SPTSSB-204ENST00000617024 1292 ntBASIC23.81■■□□□ 1.4
SIN3AQ96ST3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 U82695.1-201ENST00000635752 1889 ntBASIC23.81■■□□□ 1.4
SIN3AQ96ST3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIN3AQ96ST3 AC018695.7-201ENST00000624587 2492 ntBASIC23.81■■□□□ 1.4
SIN3AQ96ST3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 KRT8P23-201ENST00000560090 1207 ntBASIC23.8■■□□□ 1.4
SIN3AQ96ST3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 AL596087.1-201ENST00000400979 1969 ntBASIC23.8■■□□□ 1.4
SIN3AQ96ST3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC23.8■■□□□ 1.4
SIN3AQ96ST3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 AC006449.6-201ENST00000612330 2296 ntBASIC23.79■■□□□ 1.4
SIN3AQ96ST3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SIN3AQ96ST3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms