Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NEK1Q96PY6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NEK1Q96PY6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 KRT18P58-201ENST00000527480 1120 ntBASIC19.5■□□□□ 0.71
NEK1Q96PY6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 AL161645.1-201ENST00000622716 1255 ntBASIC19.5■□□□□ 0.71
NEK1Q96PY6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 AL592424.1-201ENST00000563624 1536 ntBASIC19.5■□□□□ 0.71
NEK1Q96PY6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEK1Q96PY6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NEK1Q96PY6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.49■□□□□ 0.71
NEK1Q96PY6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
NEK1Q96PY6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.49■□□□□ 0.71
NEK1Q96PY6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.49■□□□□ 0.71
NEK1Q96PY6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.49■□□□□ 0.71
NEK1Q96PY6 AC002056.1-201ENST00000395613 760 ntBASIC19.49■□□□□ 0.71
NEK1Q96PY6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.49■□□□□ 0.71
NEK1Q96PY6 POLD2P1-201ENST00000511220 997 ntBASIC19.49■□□□□ 0.71
NEK1Q96PY6 PGAM5P1-201ENST00000518923 814 ntBASIC19.49■□□□□ 0.71
NEK1Q96PY6 AC099522.2-201ENST00000607001 744 ntBASIC19.49■□□□□ 0.71
NEK1Q96PY6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.49■□□□□ 0.71
NEK1Q96PY6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.49■□□□□ 0.71
NEK1Q96PY6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEK1Q96PY6 LINC02199-201ENST00000506655 2702 ntBASIC19.49■□□□□ 0.71
NEK1Q96PY6 WASH6P-202ENST00000359512 1437 ntBASIC19.49■□□□□ 0.71
NEK1Q96PY6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
NEK1Q96PY6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NEK1Q96PY6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.49■□□□□ 0.71
NEK1Q96PY6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NEK1Q96PY6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 AC093724.1-201ENST00000448659 1027 ntBASIC19.48■□□□□ 0.71
NEK1Q96PY6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 AC112191.1-201ENST00000523689 701 ntBASIC19.48■□□□□ 0.71
NEK1Q96PY6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 AC040169.1-201ENST00000565382 521 ntBASIC19.48■□□□□ 0.71
NEK1Q96PY6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.48■□□□□ 0.71
NEK1Q96PY6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEK1Q96PY6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms