Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SNX27Q96L92 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.72■□□□□ 0.43
SNX27Q96L92 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SNX27Q96L92 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.72■□□□□ 0.43
SNX27Q96L92 PRORSD1P-202ENST00000563365 2154 ntBASIC17.72■□□□□ 0.43
SNX27Q96L92 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.72■□□□□ 0.43
SNX27Q96L92 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX27Q96L92 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SNX27Q96L92 TREML5P-201ENST00000421694 576 ntBASIC17.72■□□□□ 0.43
SNX27Q96L92 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.72■□□□□ 0.43
SNX27Q96L92 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.72■□□□□ 0.43
SNX27Q96L92 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SNX27Q96L92 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.72■□□□□ 0.43
SNX27Q96L92 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.72■□□□□ 0.43
SNX27Q96L92 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX27Q96L92 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 AGGF1P2-201ENST00000426656 2106 ntBASIC17.72■□□□□ 0.43
SNX27Q96L92 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX27Q96L92 AL133338.1-201ENST00000565695 1517 ntBASIC17.72■□□□□ 0.43
SNX27Q96L92 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 AD000864.1-201ENST00000624076 2295 ntBASIC17.72■□□□□ 0.43
SNX27Q96L92 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.72■□□□□ 0.43
SNX27Q96L92 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX27Q96L92 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SNX27Q96L92 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SNX27Q96L92 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SNX27Q96L92 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SNX27Q96L92 FO538757.1-201ENST00000623083 1397 ntBASIC17.71■□□□□ 0.43
SNX27Q96L92 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SNX27Q96L92 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SNX27Q96L92 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX27Q96L92 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX27Q96L92 AC055876.3-201ENST00000431496 288 ntBASIC17.71■□□□□ 0.43
SNX27Q96L92 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX27Q96L92 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SNX27Q96L92 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.71■□□□□ 0.43
SNX27Q96L92 AC093214.1-201ENST00000511688 1107 ntBASIC17.71■□□□□ 0.43
SNX27Q96L92 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX27Q96L92 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX27Q96L92 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
SNX27Q96L92 AL132655.2-201ENST00000596276 594 ntBASIC17.71■□□□□ 0.43
SNX27Q96L92 AL158211.3-201ENST00000607385 239 ntBASIC17.71■□□□□ 0.43
SNX27Q96L92 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX27Q96L92 AC138649.4-201ENST00000612222 287 ntBASIC17.71■□□□□ 0.43
SNX27Q96L92 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SNX27Q96L92 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNX27Q96L92 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX27Q96L92 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SNX27Q96L92 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX27Q96L92 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNX27Q96L92 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNX27Q96L92 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX27Q96L92 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNX27Q96L92 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.7■□□□□ 0.42
SNX27Q96L92 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 AC092506.1-202ENST00000401022 528 ntBASIC17.7■□□□□ 0.42
SNX27Q96L92 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 AL353705.2-201ENST00000428243 662 ntBASIC17.7■□□□□ 0.42
SNX27Q96L92 IGHV3-71-201ENST00000523324 359 ntBASIC17.7■□□□□ 0.42
SNX27Q96L92 AC069120.2-201ENST00000524091 540 ntBASIC17.7■□□□□ 0.42
SNX27Q96L92 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.7■□□□□ 0.42
SNX27Q96L92 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.7■□□□□ 0.42
SNX27Q96L92 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms