Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.9□□□□□ -0.34
RAX2Q96IS3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.9□□□□□ -0.34
RAX2Q96IS3 AC092474.2-201ENST00000424288 719 ntBASIC12.9□□□□□ -0.34
RAX2Q96IS3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.9□□□□□ -0.34
RAX2Q96IS3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.9□□□□□ -0.34
RAX2Q96IS3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RAX2Q96IS3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 AC243562.1-201ENST00000560672 389 ntBASIC12.9□□□□□ -0.34
RAX2Q96IS3 AC093520.2-201ENST00000561830 333 ntBASIC12.9□□□□□ -0.34
RAX2Q96IS3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
RAX2Q96IS3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
RAX2Q96IS3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.9□□□□□ -0.34
RAX2Q96IS3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.9□□□□□ -0.34
RAX2Q96IS3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
RAX2Q96IS3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RAX2Q96IS3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAX2Q96IS3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RAX2Q96IS3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
RAX2Q96IS3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
RAX2Q96IS3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
RAX2Q96IS3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
RAX2Q96IS3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
RAX2Q96IS3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.9□□□□□ -0.35
RAX2Q96IS3 AC092053.1-201ENST00000605787 1936 ntBASIC12.9□□□□□ -0.35
RAX2Q96IS3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.9□□□□□ -0.35
RAX2Q96IS3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 AC068418.2-201ENST00000577309 3703 ntBASIC12.89□□□□□ -0.35
RAX2Q96IS3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.89□□□□□ -0.35
RAX2Q96IS3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 HLA-J-203ENST00000494367 1087 ntBASIC12.89□□□□□ -0.35
RAX2Q96IS3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 AC109322.1-201ENST00000524499 1264 ntBASIC12.89□□□□□ -0.35
RAX2Q96IS3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 AC124947.2-201ENST00000547118 1133 ntBASIC12.89□□□□□ -0.35
RAX2Q96IS3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 CYP2A7P1-201ENST00000595391 815 ntBASIC12.89□□□□□ -0.35
RAX2Q96IS3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.89□□□□□ -0.35
RAX2Q96IS3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAX2Q96IS3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAX2Q96IS3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms