Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC002056.1-201ENST00000395613 760 ntBASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 RNA5SP416-201ENST00000516838 111 ntBASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 LINC02199-201ENST00000506655 2702 ntBASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDLIM5Q96HC4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.08■□□□□ 0.17
PDLIM5Q96HC4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PDLIM5Q96HC4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PDLIM5Q96HC4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PDLIM5Q96HC4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
PDLIM5Q96HC4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PDLIM5Q96HC4 AL596257.1-201ENST00000641463 2694 ntBASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 KRT18P3-201ENST00000451602 1288 ntBASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 SLC25A1P1-201ENST00000528351 927 ntBASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 AC073439.1-201ENST00000624121 1774 ntBASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PDLIM5Q96HC4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 AC026396.1-201ENST00000419388 421 ntBASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 AC140113.2-201ENST00000604370 208 ntBASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 AL365330.1-201ENST00000607459 531 ntBASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 AL513190.1-201ENST00000621254 727 ntBASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.07■□□□□ 0.16
PDLIM5Q96HC4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms