Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTP4Q96DX8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RTP4Q96DX8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
RTP4Q96DX8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTP4Q96DX8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTP4Q96DX8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RTP4Q96DX8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTP4Q96DX8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.77■□□□□ 0.28
RTP4Q96DX8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTP4Q96DX8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTP4Q96DX8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTP4Q96DX8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RTP4Q96DX8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTP4Q96DX8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.77■□□□□ 0.28
RTP4Q96DX8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RTP4Q96DX8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RTP4Q96DX8 AC140658.5-201ENST00000438532 169 ntBASIC16.77■□□□□ 0.28
RTP4Q96DX8 AC092183.1-201ENST00000469884 875 ntBASIC16.77■□□□□ 0.28
RTP4Q96DX8 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.77■□□□□ 0.28
RTP4Q96DX8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.77■□□□□ 0.28
RTP4Q96DX8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.77■□□□□ 0.28
RTP4Q96DX8 AC023141.13-201ENST00000604991 943 ntBASIC16.77■□□□□ 0.28
RTP4Q96DX8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.77■□□□□ 0.28
RTP4Q96DX8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTP4Q96DX8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.77■□□□□ 0.27
RTP4Q96DX8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RTP4Q96DX8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RTP4Q96DX8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.77■□□□□ 0.27
RTP4Q96DX8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.77■□□□□ 0.27
RTP4Q96DX8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RTP4Q96DX8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.77■□□□□ 0.27
RTP4Q96DX8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.77■□□□□ 0.27
RTP4Q96DX8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
RTP4Q96DX8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 RNA5SP416-201ENST00000516838 111 ntBASIC16.76■□□□□ 0.27
RTP4Q96DX8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 AC040169.1-201ENST00000565382 521 ntBASIC16.76■□□□□ 0.27
RTP4Q96DX8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 AL078644.1-201ENST00000609881 752 ntBASIC16.76■□□□□ 0.27
RTP4Q96DX8 AC007064.4-201ENST00000637740 555 ntBASIC16.76■□□□□ 0.27
RTP4Q96DX8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
RTP4Q96DX8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTP4Q96DX8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.75■□□□□ 0.27
RTP4Q96DX8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTP4Q96DX8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms