Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AL035456.1-201ENST00000456064 1369 ntBASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 AL391825.1-201ENST00000457671 1364 ntBASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 MIR4525-201ENST00000580000 75 ntBASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 AL139327.4-201ENST00000612362 153 ntBASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 AL033527.4-201ENST00000641026 673 ntBASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.82■□□□□ 0.6
U2AF1L4Q8WU68 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 AC105233.2-201ENST00000523697 349 ntBASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 AF228730.5-201ENST00000530288 346 ntBASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 AC008494.3-201ENST00000606615 944 ntBASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
U2AF1L4Q8WU68 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 AC135586.1-201ENST00000539323 574 ntBASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 WASH4P-201ENST00000564273 1246 ntBASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
U2AF1L4Q8WU68 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms