Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHROOM3Q8TF72 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 AC109635.5-201ENST00000533593 962 ntBASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.77■□□□□ 0.27
SHROOM3Q8TF72 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 AL592424.1-201ENST00000563624 1536 ntBASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 FAM220BP-201ENST00000377689 816 ntBASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.76■□□□□ 0.27
SHROOM3Q8TF72 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 POU5F1P6-201ENST00000466990 990 ntBASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 AC027307.2-201ENST00000591252 911 ntBASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 BCRP1-201ENST00000444246 691 ntBASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SHROOM3Q8TF72 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 AC026691.1-201ENST00000602502 2017 ntBASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 AC002056.1-201ENST00000395613 760 ntBASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.74■□□□□ 0.27
SHROOM3Q8TF72 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms