Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 MIR5100-201ENST00000579544 119 ntBASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 MIR3180-1-201ENST00000580374 94 ntBASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 MIR3180-3-201ENST00000584616 94 ntBASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 AL645728.1-201ENST00000366221 2101 ntBASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIML2Q8N7C3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 HLA-A-202ENST00000376806 1854 ntBASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 AL391256.1-201ENST00000443260 1855 ntBASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 AP002414.1-201ENST00000391405 1147 ntBASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 AL591684.3-201ENST00000605187 298 ntBASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 AC091076.1-201ENST00000610741 619 ntBASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 AC004817.3-201ENST00000602957 2129 ntBASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIML2Q8N7C3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 ATP5G2P1-201ENST00000433580 426 ntBASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 KRT16P4-201ENST00000453883 522 ntBASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 HLA-J-202ENST00000469281 1241 ntBASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 NPAP1P7-201ENST00000613027 823 ntBASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRIML2Q8N7C3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIML2Q8N7C3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms