Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 AL121894.2-201ENST00000602977 491 ntBASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 AL031055.1-201ENST00000606362 631 ntBASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 BX640515.1-201ENST00000617215 977 ntBASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 ZNF259P1-201ENST00000407656 1365 ntBASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 AL590627.1-203ENST00000421194 1026 ntBASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 AC064836.3-201ENST00000607928 673 ntBASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TTC9CQ8N5M4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms