Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 SERBP1P3-201ENST00000459980 809 ntBASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 AC104794.3-201ENST00000566840 1248 ntBASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 AC106886.1-201ENST00000568660 600 ntBASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPOQ8N3V7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 AC006277.1-201ENST00000624348 1610 ntBASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 RN7SL752P-201ENST00000463779 287 ntBASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 AC024267.1-201ENST00000582320 895 ntBASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 AL162274.1-201ENST00000617191 1098 ntBASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 OR6D1P-202ENST00000641007 5290 ntBASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SYNPOQ8N3V7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 NKILA-202ENST00000614771 2598 ntBASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 DGCR5-201ENST00000399539 862 ntBASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 DOC2GP-202ENST00000514950 1163 ntBASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.67■□□□□ 0.26
SYNPOQ8N3V7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms