Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 RN7SL850P-201ENST00000579959 291 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 AC099336.1-202ENST00000602961 463 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 GGTLC5P-201ENST00000617623 998 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 AC004706.3-202ENST00000621574 984 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 AL805961.1-202ENST00000641562 540 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 AL592424.1-201ENST00000563624 1536 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 REXO1L8P-201ENST00000604378 1897 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 LINC02447-202ENST00000501888 2146 ntBASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 ARMC10P1-201ENST00000313754 855 ntBASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 TMPOP1-202ENST00000424642 1267 ntBASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 BX005266.1-201ENST00000473402 457 ntBASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 AP000867.3-201ENST00000524675 377 ntBASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 MIR3180-1-201ENST00000580374 94 ntBASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 MIR3180-3-201ENST00000584616 94 ntBASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
LINC01561Q8N1V8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 321.7 ms