Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 AL627223.1-201ENST00000416693 442 ntBASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 AC243562.1-201ENST00000560672 389 ntBASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 AL118508.1-201ENST00000613502 2345 ntBASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM48Q8IWZ4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 AL391005.1-201ENST00000623953 2435 ntBASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM48Q8IWZ4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM48Q8IWZ4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TRIM48Q8IWZ4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
TRIM48Q8IWZ4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM48Q8IWZ4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM48Q8IWZ4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM48Q8IWZ4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM48Q8IWZ4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms