Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 HMGA1P7-201ENST00000406908 502 ntBASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 AL031284.1-201ENST00000419297 478 ntBASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 CXCL1P1-201ENST00000502804 216 ntBASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 MIR4515-201ENST00000584082 81 ntBASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 AC020765.3-201ENST00000613051 740 ntBASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 AL773604.1-201ENST00000617417 272 ntBASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 HYMAI-201ENST00000635591 3347 ntBASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC83Q8IWF9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC83Q8IWF9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC83Q8IWF9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC83Q8IWF9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC83Q8IWF9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC83Q8IWF9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC83Q8IWF9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.39■□□□□ 0.7
CCDC83Q8IWF9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 MRPL3P1-201ENST00000400109 1033 ntBASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 AL450487.1-201ENST00000426799 995 ntBASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC83Q8IWF9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 RNU1-129P-201ENST00000384064 167 ntBASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 U1.21-201ENST00000580816 167 ntBASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 AC116407.3-201ENST00000623905 1129 ntBASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC83Q8IWF9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms