Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VRK2Q86Y07 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK2Q86Y07 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VRK2Q86Y07 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK2Q86Y07 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK2Q86Y07 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK2Q86Y07 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK2Q86Y07 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK2Q86Y07 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VRK2Q86Y07 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 IGLL3P-201ENST00000412472 434 ntBASIC15.27■□□□□ 0.04
VRK2Q86Y07 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.27■□□□□ 0.04
VRK2Q86Y07 VN2R19P-201ENST00000442399 1052 ntBASIC15.27■□□□□ 0.04
VRK2Q86Y07 AC009947.1-201ENST00000444350 727 ntBASIC15.27■□□□□ 0.04
VRK2Q86Y07 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 AP001005.1-201ENST00000571755 1248 ntBASIC15.27■□□□□ 0.04
VRK2Q86Y07 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.27■□□□□ 0.04
VRK2Q86Y07 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK2Q86Y07 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
VRK2Q86Y07 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
VRK2Q86Y07 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK2Q86Y07 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK2Q86Y07 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK2Q86Y07 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK2Q86Y07 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK2Q86Y07 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
VRK2Q86Y07 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
VRK2Q86Y07 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.27■□□□□ 0.03
VRK2Q86Y07 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.27■□□□□ 0.03
VRK2Q86Y07 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VRK2Q86Y07 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.27■□□□□ 0.03
VRK2Q86Y07 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
VRK2Q86Y07 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
VRK2Q86Y07 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 AC010491.1-201ENST00000563101 2797 ntBASIC15.26■□□□□ 0.03
VRK2Q86Y07 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.26■□□□□ 0.03
VRK2Q86Y07 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.26■□□□□ 0.03
VRK2Q86Y07 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.26■□□□□ 0.03
VRK2Q86Y07 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
VRK2Q86Y07 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.26■□□□□ 0.03
VRK2Q86Y07 RNU1-129P-201ENST00000384064 167 ntBASIC15.26■□□□□ 0.03
VRK2Q86Y07 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.26■□□□□ 0.03
VRK2Q86Y07 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 AC093909.1-201ENST00000504731 1122 ntBASIC15.26■□□□□ 0.03
VRK2Q86Y07 RNA5SP415-201ENST00000517246 115 ntBASIC15.26■□□□□ 0.03
VRK2Q86Y07 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
VRK2Q86Y07 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.26■□□□□ 0.03
VRK2Q86Y07 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.26■□□□□ 0.03
VRK2Q86Y07 U1.21-201ENST00000580816 167 ntBASIC15.26■□□□□ 0.03
VRK2Q86Y07 AL031055.1-201ENST00000606362 631 ntBASIC15.26■□□□□ 0.03
VRK2Q86Y07 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.26■□□□□ 0.03
VRK2Q86Y07 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 AL603832.2-201ENST00000566195 2125 ntBASIC15.26■□□□□ 0.03
VRK2Q86Y07 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.26■□□□□ 0.03
VRK2Q86Y07 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms