Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 AP001889.1-201ENST00000525414 633 ntBASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 BRI3BPP1-201ENST00000594224 787 ntBASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
KRT28Q7Z3Y7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 AC067852.2-201ENST00000590513 2313 ntBASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 U82695.1-201ENST00000635752 1889 ntBASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 AL390961.4-201ENST00000623958 2535 ntBASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 RPL13P2-201ENST00000440687 659 ntBASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 AC007551.1-201ENST00000457394 519 ntBASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 AP002490.2-201ENST00000524791 560 ntBASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 AP000812.2-201ENST00000538934 718 ntBASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 MIR3615-201ENST00000581999 87 ntBASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT28Q7Z3Y7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 GOLGA2P4-201ENST00000441462 777 ntBASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT28Q7Z3Y7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 FAM86LP-201ENST00000478302 853 ntBASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 ZNF767P-206ENST00000513792 565 ntBASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 AC068587.3-201ENST00000526613 355 ntBASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 AL139099.5-201ENST00000635274 300 ntBASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 AC005622.1-201ENST00000636801 1703 ntBASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT28Q7Z3Y7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms