Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 HLA-DQB2-229ENST00000411527 1059 ntBASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 KRTAP19-9P-201ENST00000421795 191 ntBASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 POM121L10P-201ENST00000436994 1285 ntBASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 KRT18P43-201ENST00000469825 1281 ntBASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RGPD4Q7Z3J3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 MIR1202-201ENST00000408529 83 ntBASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 AC008267.1-201ENST00000474858 1069 ntBASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 RN7SL720P-201ENST00000488178 304 ntBASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 AP002490.2-201ENST00000524791 560 ntBASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 AL451050.2-201ENST00000606967 682 ntBASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RGPD4Q7Z3J3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 FAM197Y7-201ENST00000432892 766 ntBASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 RN7SL574P-201ENST00000581512 297 ntBASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC20.39■□□□□ 0.86
RGPD4Q7Z3J3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RGPD4Q7Z3J3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RGPD4Q7Z3J3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.39■□□□□ 0.85
RGPD4Q7Z3J3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.39■□□□□ 0.85
RGPD4Q7Z3J3 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RGPD4Q7Z3J3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RGPD4Q7Z3J3 AC026410.3-201ENST00000514280 936 ntBASIC20.39■□□□□ 0.85
RGPD4Q7Z3J3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.39■□□□□ 0.85
RGPD4Q7Z3J3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RGPD4Q7Z3J3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RGPD4Q7Z3J3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 AC016700.1-201ENST00000429424 312 ntBASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 FNTAP2-201ENST00000430308 634 ntBASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 AL138709.1-201ENST00000614840 1693 ntBASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RGPD4Q7Z3J3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RGPD4Q7Z3J3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms