Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 AC087163.2-201ENST00000457299 853 ntBASIC16.65■□□□□ 0.26
RAPH1Q70E73 SCARNA2-201ENST00000458748 420 ntBASIC16.65■□□□□ 0.26
RAPH1Q70E73 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 SART3-203ENST00000546611 1184 ntBASIC16.65■□□□□ 0.26
RAPH1Q70E73 MPDU1-223ENST00000582151 728 ntBASIC16.65■□□□□ 0.26
RAPH1Q70E73 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 AC004706.3-202ENST00000621574 984 ntBASIC16.65■□□□□ 0.26
RAPH1Q70E73 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAPH1Q70E73 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAPH1Q70E73 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAPH1Q70E73 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAPH1Q70E73 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAPH1Q70E73 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.65■□□□□ 0.26
RAPH1Q70E73 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RAPH1Q70E73 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.64■□□□□ 0.26
RAPH1Q70E73 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RAPH1Q70E73 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 PTCHD3P3-201ENST00000403073 906 ntBASIC16.64■□□□□ 0.25
RAPH1Q70E73 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 AC091304.2-201ENST00000564639 760 ntBASIC16.64■□□□□ 0.25
RAPH1Q70E73 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 AF228730.7-201ENST00000641842 219 ntBASIC16.64■□□□□ 0.25
RAPH1Q70E73 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RAPH1Q70E73 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 AC002310.6-201ENST00000624451 1377 ntBASIC16.64■□□□□ 0.25
RAPH1Q70E73 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAPH1Q70E73 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.63■□□□□ 0.25
RAPH1Q70E73 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 DBET-201ENST00000630918 3363 ntBASIC16.63■□□□□ 0.25
RAPH1Q70E73 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.63■□□□□ 0.25
RAPH1Q70E73 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.63■□□□□ 0.25
RAPH1Q70E73 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.63■□□□□ 0.25
RAPH1Q70E73 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.63■□□□□ 0.25
RAPH1Q70E73 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.63■□□□□ 0.25
RAPH1Q70E73 FGFR3P6-201ENST00000457012 610 ntBASIC16.63■□□□□ 0.25
RAPH1Q70E73 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.63■□□□□ 0.25
RAPH1Q70E73 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAPH1Q70E73 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.63■□□□□ 0.25
RAPH1Q70E73 PRELID1P1-202ENST00000567272 903 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms